Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Atoh1P48985 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Atoh1P48985 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.68■□□□□ 0.26
Atoh1P48985 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atoh1P48985 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Atoh1P48985 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.67■□□□□ 0.26
Atoh1P48985 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Gm4984-201ENSMUST00000115987 360 ntBASIC16.67■□□□□ 0.26
Atoh1P48985 Gm12585-201ENSMUST00000117307 290 ntBASIC16.67■□□□□ 0.26
Atoh1P48985 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.67■□□□□ 0.26
Atoh1P48985 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.67■□□□□ 0.26
Atoh1P48985 Gm6916-202ENSMUST00000205523 195 ntBASIC16.67■□□□□ 0.26
Atoh1P48985 Gm9182-201ENSMUST00000217829 639 ntBASIC16.67■□□□□ 0.26
Atoh1P48985 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Atoh1P48985 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.67■□□□□ 0.26
Atoh1P48985 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atoh1P48985 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.67■□□□□ 0.26
Atoh1P48985 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atoh1P48985 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Atoh1P48985 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Atoh1P48985 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.66■□□□□ 0.26
Atoh1P48985 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.66■□□□□ 0.26
Atoh1P48985 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.66■□□□□ 0.26
Atoh1P48985 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.66■□□□□ 0.26
Atoh1P48985 Gm27701-201ENSMUST00000184498 110 ntBASIC16.66■□□□□ 0.26
Atoh1P48985 Gm27892-201ENSMUST00000185017 106 ntBASIC16.66■□□□□ 0.26
Atoh1P48985 AA619741-201ENSMUST00000195095 646 ntBASIC16.66■□□□□ 0.26
Atoh1P48985 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.66■□□□□ 0.26
Atoh1P48985 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Atoh1P48985 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Atoh1P48985 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atoh1P48985 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atoh1P48985 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.65■□□□□ 0.26
Atoh1P48985 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atoh1P48985 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atoh1P48985 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atoh1P48985 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atoh1P48985 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.65■□□□□ 0.26
Atoh1P48985 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atoh1P48985 Gm8749-201ENSMUST00000117737 331 ntBASIC16.65■□□□□ 0.26
Atoh1P48985 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.65■□□□□ 0.26
Atoh1P48985 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.65■□□□□ 0.26
Atoh1P48985 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.65■□□□□ 0.26
Atoh1P48985 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.65■□□□□ 0.26
Atoh1P48985 Gm28911-201ENSMUST00000188837 117 ntBASIC16.65■□□□□ 0.26
Atoh1P48985 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.65■□□□□ 0.26
Atoh1P48985 Gm37230-201ENSMUST00000194491 818 ntBASIC16.65■□□□□ 0.26
Atoh1P48985 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.65■□□□□ 0.26
Atoh1P48985 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.65■□□□□ 0.26
Atoh1P48985 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atoh1P48985 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.65■□□□□ 0.26
Atoh1P48985 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atoh1P48985 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.65■□□□□ 0.26
Atoh1P48985 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atoh1P48985 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atoh1P48985 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atoh1P48985 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atoh1P48985 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atoh1P48985 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.65■□□□□ 0.26
Atoh1P48985 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms