Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.55■□□□□ 0.08
HttP42859 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
HttP42859 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HttP42859 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.55■□□□□ 0.08
HttP42859 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.55■□□□□ 0.08
HttP42859 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.55■□□□□ 0.08
HttP42859 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.55■□□□□ 0.08
HttP42859 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
HttP42859 Nsd1-205ENSMUST00000224693 852 ntBASIC15.55■□□□□ 0.08
HttP42859 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HttP42859 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HttP42859 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.55■□□□□ 0.08
HttP42859 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HttP42859 Gm10156-201ENSMUST00000122364 462 ntBASIC15.54■□□□□ 0.08
HttP42859 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.54■□□□□ 0.08
HttP42859 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Gm45865-201ENSMUST00000211815 945 ntBASIC15.54■□□□□ 0.08
HttP42859 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HttP42859 Mir877-201ENSMUST00000104738 85 ntBASIC15.54■□□□□ 0.08
HttP42859 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HttP42859 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.54■□□□□ 0.08
HttP42859 Gm13342-201ENSMUST00000121055 207 ntBASIC15.54■□□□□ 0.08
HttP42859 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.54■□□□□ 0.08
HttP42859 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.54■□□□□ 0.08
HttP42859 Gm38341-201ENSMUST00000195357 515 ntBASIC15.54■□□□□ 0.08
HttP42859 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.54■□□□□ 0.08
HttP42859 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.54■□□□□ 0.08
HttP42859 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HttP42859 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.54■□□□□ 0.08
HttP42859 Gm24514-201ENSMUST00000174961 285 ntBASIC15.54■□□□□ 0.08
HttP42859 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HttP42859 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HttP42859 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.53■□□□□ 0.08
HttP42859 Gm13689-201ENSMUST00000119360 685 ntBASIC15.53■□□□□ 0.08
HttP42859 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HttP42859 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HttP42859 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.53■□□□□ 0.08
HttP42859 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HttP42859 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HttP42859 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.52■□□□□ 0.08
HttP42859 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.52■□□□□ 0.08
HttP42859 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.52■□□□□ 0.08
HttP42859 Gm9182-201ENSMUST00000217829 639 ntBASIC15.52■□□□□ 0.08
HttP42859 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.52■□□□□ 0.08
HttP42859 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Gm15460-201ENSMUST00000118147 391 ntBASIC15.52■□□□□ 0.08
HttP42859 Gm13464-201ENSMUST00000119418 935 ntBASIC15.52■□□□□ 0.08
HttP42859 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Cts7-204ENSMUST00000225321 1257 ntBASIC15.52■□□□□ 0.08
HttP42859 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HttP42859 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HttP42859 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
HttP42859 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HttP42859 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HttP42859 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms