Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cd27P41272 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cd27P41272 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.89□□□□□ -0.51
Cd27P41272 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.89□□□□□ -0.51
Cd27P41272 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.89□□□□□ -0.51
Cd27P41272 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.89□□□□□ -0.51
Cd27P41272 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cd27P41272 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cd27P41272 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cd27P41272 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cd27P41272 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cd27P41272 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Cd27P41272 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.88□□□□□ -0.51
Cd27P41272 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cd27P41272 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Gm13464-201ENSMUST00000119418 935 ntBASIC11.88□□□□□ -0.51
Cd27P41272 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.88□□□□□ -0.51
Cd27P41272 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.88□□□□□ -0.51
Cd27P41272 Gm17271-201ENSMUST00000165535 355 ntBASIC11.88□□□□□ -0.51
Cd27P41272 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Gm2213-201ENSMUST00000197485 688 ntBASIC11.88□□□□□ -0.51
Cd27P41272 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.88□□□□□ -0.51
Cd27P41272 Gm45612-201ENSMUST00000211320 160 ntBASIC11.88□□□□□ -0.51
Cd27P41272 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cd27P41272 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Cd27P41272 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.88□□□□□ -0.51
Cd27P41272 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.88□□□□□ -0.51
Cd27P41272 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.88□□□□□ -0.51
Cd27P41272 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cd27P41272 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.88□□□□□ -0.51
Cd27P41272 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cd27P41272 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.88□□□□□ -0.51
Cd27P41272 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cd27P41272 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cd27P41272 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cd27P41272 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cd27P41272 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Cd27P41272 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.87□□□□□ -0.51
Cd27P41272 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.87□□□□□ -0.51
Cd27P41272 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.87□□□□□ -0.51
Cd27P41272 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cd27P41272 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.87□□□□□ -0.51
Cd27P41272 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.87□□□□□ -0.51
Cd27P41272 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cd27P41272 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
Cd27P41272 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cd27P41272 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cd27P41272 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms