Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rpl3P27659 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpl3P27659 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpl3P27659 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rpl3P27659 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpl3P27659 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpl3P27659 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpl3P27659 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpl3P27659 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.08□□□□□ -0.16
Rpl3P27659 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rpl3P27659 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rpl3P27659 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Rpl3P27659 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.08□□□□□ -0.16
Rpl3P27659 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.08□□□□□ -0.16
Rpl3P27659 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpl3P27659 Gm28659-201ENSMUST00000188013 759 ntBASIC14.08□□□□□ -0.16
Rpl3P27659 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.08□□□□□ -0.16
Rpl3P27659 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
Rpl3P27659 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.08□□□□□ -0.16
Rpl3P27659 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpl3P27659 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpl3P27659 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpl3P27659 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpl3P27659 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpl3P27659 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpl3P27659 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpl3P27659 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rpl3P27659 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpl3P27659 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.07□□□□□ -0.16
Rpl3P27659 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.07□□□□□ -0.16
Rpl3P27659 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Rpl3P27659 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpl3P27659 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpl3P27659 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpl3P27659 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpl3P27659 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Rpl3P27659 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rpl3P27659 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpl3P27659 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms