Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.87□□□□□ -0.19
Clk1P22518 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.87□□□□□ -0.19
Clk1P22518 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clk1P22518 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clk1P22518 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clk1P22518 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.86□□□□□ -0.19
Clk1P22518 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.86□□□□□ -0.19
Clk1P22518 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Gm5682-201ENSMUST00000173402 505 ntBASIC13.86□□□□□ -0.19
Clk1P22518 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.86□□□□□ -0.19
Clk1P22518 Gm9682-201ENSMUST00000197505 556 ntBASIC13.86□□□□□ -0.19
Clk1P22518 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Clk1P22518 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Clk1P22518 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.86□□□□□ -0.19
Clk1P22518 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.86□□□□□ -0.19
Clk1P22518 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.86□□□□□ -0.19
Clk1P22518 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk1P22518 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Clk1P22518 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.85□□□□□ -0.19
Clk1P22518 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clk1P22518 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Clk1P22518 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Clk1P22518 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Clk1P22518 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Efs-202ENSMUST00000227037 2540 ntBASIC13.85□□□□□ -0.19
Clk1P22518 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Gm15173-201ENSMUST00000122049 433 ntBASIC13.85□□□□□ -0.19
Clk1P22518 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.85□□□□□ -0.19
Clk1P22518 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
Clk1P22518 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk1P22518 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Clk1P22518 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.84□□□□□ -0.19
Clk1P22518 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.84□□□□□ -0.19
Clk1P22518 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.84□□□□□ -0.19
Clk1P22518 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Clk1P22518 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk1P22518 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms