Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl1P12850 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Cxcl1P12850 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Gm27704-201ENSMUST00000185094 107 ntBASIC12.3□□□□□ -0.44
Cxcl1P12850 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Gm6296-201ENSMUST00000222599 943 ntBASIC12.3□□□□□ -0.44
Cxcl1P12850 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.3□□□□□ -0.44
Cxcl1P12850 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.3□□□□□ -0.44
Cxcl1P12850 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl1P12850 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl1P12850 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Cxcl1P12850 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cxcl1P12850 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.29□□□□□ -0.44
Cxcl1P12850 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.29□□□□□ -0.44
Cxcl1P12850 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cxcl1P12850 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cxcl1P12850 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl1P12850 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.29□□□□□ -0.44
Cxcl1P12850 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl1P12850 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms