Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.3□□□□□ -0.6
Fn1P11276 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Fn1P11276 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Fn1P11276 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Fn1P11276 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.3□□□□□ -0.6
Fn1P11276 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Fn1P11276 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.3□□□□□ -0.6
Fn1P11276 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Fn1P11276 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.3□□□□□ -0.6
Fn1P11276 Gm12928-201ENSMUST00000117115 573 ntBASIC11.3□□□□□ -0.6
Fn1P11276 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Gm24644-201ENSMUST00000157114 139 ntBASIC11.3□□□□□ -0.6
Fn1P11276 BC001981-202ENSMUST00000191393 1545 ntBASIC11.3□□□□□ -0.6
Fn1P11276 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.3□□□□□ -0.6
Fn1P11276 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.3□□□□□ -0.6
Fn1P11276 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fn1P11276 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC11.3□□□□□ -0.6
Fn1P11276 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Fn1P11276 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.29□□□□□ -0.6
Fn1P11276 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Mir877-201ENSMUST00000104738 85 ntBASIC11.29□□□□□ -0.6
Fn1P11276 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Fn1P11276 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Fn1P11276 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Gm38341-201ENSMUST00000195357 515 ntBASIC11.29□□□□□ -0.6
Fn1P11276 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.29□□□□□ -0.6
Fn1P11276 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Fn1P11276 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Fn1P11276 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.29□□□□□ -0.6
Fn1P11276 Gm12997-201ENSMUST00000120207 640 ntBASIC11.29□□□□□ -0.6
Fn1P11276 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.29□□□□□ -0.6
Fn1P11276 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Fn1P11276 Gm44364-201ENSMUST00000198368 141 ntBASIC11.29□□□□□ -0.6
Fn1P11276 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.29□□□□□ -0.6
Fn1P11276 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fn1P11276 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.28□□□□□ -0.6
Fn1P11276 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Fn1P11276 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Gm11628-201ENSMUST00000117568 171 ntBASIC11.28□□□□□ -0.6
Fn1P11276 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.28□□□□□ -0.6
Fn1P11276 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.28□□□□□ -0.6
Fn1P11276 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.28□□□□□ -0.6
Fn1P11276 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.28□□□□□ -0.6
Fn1P11276 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.28□□□□□ -0.6
Fn1P11276 Gm38266-201ENSMUST00000194931 421 ntBASIC11.28□□□□□ -0.6
Fn1P11276 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Fn1P11276 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.28□□□□□ -0.6
Fn1P11276 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fn1P11276 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms