Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
P06344 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
P06344 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
P06344 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.23□□□□□ -0.29
P06344 Gm43767-201ENSMUST00000198933 381 ntBASIC13.23□□□□□ -0.29
P06344 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.23□□□□□ -0.29
P06344 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
P06344 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.23□□□□□ -0.29
P06344 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.23□□□□□ -0.29
P06344 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
P06344 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.22□□□□□ -0.29
P06344 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P06344 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.22□□□□□ -0.29
P06344 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.22□□□□□ -0.29
P06344 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.22□□□□□ -0.29
P06344 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.22□□□□□ -0.29
P06344 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.22□□□□□ -0.29
P06344 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.22□□□□□ -0.29
P06344 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.22□□□□□ -0.29
P06344 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P06344 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.22□□□□□ -0.29
P06344 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.22□□□□□ -0.29
P06344 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P06344 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.22□□□□□ -0.29
P06344 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
P06344 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P06344 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.21□□□□□ -0.29
P06344 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.21□□□□□ -0.29
P06344 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
P06344 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
P06344 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
P06344 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
P06344 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
P06344 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
P06344 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.21□□□□□ -0.29
P06344 Gm13365-201ENSMUST00000121188 973 ntBASIC13.21□□□□□ -0.29
P06344 Rprl2-201ENSMUST00000157150 290 ntBASIC13.21□□□□□ -0.29
P06344 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.21□□□□□ -0.29
P06344 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.21□□□□□ -0.29
P06344 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.21□□□□□ -0.29
P06344 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
P06344 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P06344 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
P06344 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms