Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
P04213 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
P04213 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
P04213 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.25□□□□□ -0.13
P04213 Gm12008-201ENSMUST00000117791 755 ntBASIC14.25□□□□□ -0.13
P04213 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.25□□□□□ -0.13
P04213 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.25□□□□□ -0.13
P04213 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
P04213 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
P04213 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
P04213 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
P04213 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.25□□□□□ -0.13
P04213 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.25□□□□□ -0.13
P04213 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
P04213 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04213 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
P04213 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.24□□□□□ -0.13
P04213 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Gm12350-201ENSMUST00000121208 462 ntBASIC14.24□□□□□ -0.13
P04213 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.24□□□□□ -0.13
P04213 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
P04213 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.24□□□□□ -0.13
P04213 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
P04213 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
P04213 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
P04213 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
P04213 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04213 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.23□□□□□ -0.13
P04213 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
P04213 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.23□□□□□ -0.13
P04213 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.23□□□□□ -0.13
P04213 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.23□□□□□ -0.13
P04213 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
P04213 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
P04213 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.23□□□□□ -0.13
P04213 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
P04213 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04213 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms