Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.06□□□□□ -0.16
Krt1P04104 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Krt1P04104 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.06□□□□□ -0.16
Krt1P04104 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt1P04104 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.05□□□□□ -0.16
Krt1P04104 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.05□□□□□ -0.16
Krt1P04104 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Krt1P04104 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.05□□□□□ -0.16
Krt1P04104 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Krt1P04104 Gm25406-201ENSMUST00000157599 105 ntBASIC14.05□□□□□ -0.16
Krt1P04104 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Krt1P04104 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.05□□□□□ -0.16
Krt1P04104 Gm19164-201ENSMUST00000210667 640 ntBASIC14.05□□□□□ -0.16
Krt1P04104 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.05□□□□□ -0.16
Krt1P04104 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Krt1P04104 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Krt1P04104 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.05□□□□□ -0.16
Krt1P04104 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt1P04104 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.04□□□□□ -0.16
Krt1P04104 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Krt1P04104 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Krt1P04104 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Krt1P04104 Gm37722-201ENSMUST00000193757 208 ntBASIC14.04□□□□□ -0.16
Krt1P04104 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Krt1P04104 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Krt1P04104 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt1P04104 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt1P04104 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Krt1P04104 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt1P04104 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt1P04104 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt1P04104 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt1P04104 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.03□□□□□ -0.16
Krt1P04104 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Krt1P04104 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.03□□□□□ -0.16
Krt1P04104 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.03□□□□□ -0.16
Krt1P04104 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.03□□□□□ -0.16
Krt1P04104 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.03□□□□□ -0.16
Krt1P04104 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms