Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Lmx1bO88609 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.47□□□□□ -0.25
Lmx1bO88609 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lmx1bO88609 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lmx1bO88609 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lmx1bO88609 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lmx1bO88609 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.46□□□□□ -0.25
Lmx1bO88609 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lmx1bO88609 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lmx1bO88609 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.46□□□□□ -0.25
Lmx1bO88609 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lmx1bO88609 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lmx1bO88609 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Lmx1bO88609 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lmx1bO88609 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Lmx1bO88609 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.46□□□□□ -0.25
Lmx1bO88609 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.46□□□□□ -0.25
Lmx1bO88609 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lmx1bO88609 Rprl2-201ENSMUST00000157150 290 ntBASIC13.46□□□□□ -0.25
Lmx1bO88609 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Lmx1bO88609 Gm18889-201ENSMUST00000174284 929 ntBASIC13.46□□□□□ -0.25
Lmx1bO88609 Auts2-212ENSMUST00000178555 309 ntBASIC13.46□□□□□ -0.25
Lmx1bO88609 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.46□□□□□ -0.25
Lmx1bO88609 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.46□□□□□ -0.25
Lmx1bO88609 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lmx1bO88609 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lmx1bO88609 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.46□□□□□ -0.26
Lmx1bO88609 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lmx1bO88609 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lmx1bO88609 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lmx1bO88609 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Lmx1bO88609 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.46□□□□□ -0.26
Lmx1bO88609 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Lmx1bO88609 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Lmx1bO88609 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lmx1bO88609 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.46□□□□□ -0.26
Lmx1bO88609 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Mir6990-201ENSMUST00000183724 91 ntBASIC13.45□□□□□ -0.26
Lmx1bO88609 Gm2272-201ENSMUST00000194903 582 ntBASIC13.45□□□□□ -0.26
Lmx1bO88609 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Gm43474-201ENSMUST00000196415 774 ntBASIC13.45□□□□□ -0.26
Lmx1bO88609 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Lmx1bO88609 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Lmx1bO88609 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.45□□□□□ -0.26
Lmx1bO88609 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Lmx1bO88609 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lmx1bO88609 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.44□□□□□ -0.26
Lmx1bO88609 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lmx1bO88609 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lmx1bO88609 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.44□□□□□ -0.26
Lmx1bO88609 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 Gm13616-201ENSMUST00000120600 222 ntBASIC13.44□□□□□ -0.26
Lmx1bO88609 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lmx1bO88609 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms