Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Gm7222-201ENSMUST00000117512 906 ntBASIC17.67■□□□□ 0.42
Smarce1O54941 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.67■□□□□ 0.42
Smarce1O54941 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.67■□□□□ 0.42
Smarce1O54941 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarce1O54941 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.67■□□□□ 0.42
Smarce1O54941 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.67■□□□□ 0.42
Smarce1O54941 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smarce1O54941 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarce1O54941 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.66■□□□□ 0.42
Smarce1O54941 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Smarce1O54941 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smarce1O54941 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarce1O54941 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Smarce1O54941 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarce1O54941 Gm25990-201ENSMUST00000102440 86 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarce1O54941 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarce1O54941 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44357-201ENSMUST00000195897 142 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm19658-201ENSMUST00000196231 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44367-201ENSMUST00000196836 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44350-201ENSMUST00000197197 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44390-201ENSMUST00000197533 144 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44313-201ENSMUST00000198018 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44486-201ENSMUST00000198508 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44314-201ENSMUST00000199263 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44394-201ENSMUST00000199558 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44484-201ENSMUST00000199873 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44466-201ENSMUST00000200264 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44359-201ENSMUST00000200671 138 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarce1O54941 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarce1O54941 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarce1O54941 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Smarce1O54941 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smarce1O54941 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarce1O54941 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarce1O54941 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.66■□□□□ 0.42
Smarce1O54941 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarce1O54941 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.65■□□□□ 0.42
Smarce1O54941 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smarce1O54941 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Smarce1O54941 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smarce1O54941 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.65■□□□□ 0.42
Smarce1O54941 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.65■□□□□ 0.42
Smarce1O54941 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smarce1O54941 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarce1O54941 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarce1O54941 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Smarce1O54941 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Smarce1O54941 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarce1O54941 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Smarce1O54941 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smarce1O54941 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smarce1O54941 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smarce1O54941 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Smarce1O54941 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Smarce1O54941 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarce1O54941 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms