Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.5□□□□□ -0.09
Npc1O35604 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Npc1O35604 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.5□□□□□ -0.09
Npc1O35604 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.5□□□□□ -0.09
Npc1O35604 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Npc1O35604 Gm27494-201ENSMUST00000184735 189 ntBASIC14.5□□□□□ -0.09
Npc1O35604 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.5□□□□□ -0.09
Npc1O35604 Gm43575-201ENSMUST00000196420 516 ntBASIC14.5□□□□□ -0.09
Npc1O35604 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.5□□□□□ -0.09
Npc1O35604 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.5□□□□□ -0.09
Npc1O35604 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.5□□□□□ -0.09
Npc1O35604 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.5□□□□□ -0.09
Npc1O35604 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Npc1O35604 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.5□□□□□ -0.09
Npc1O35604 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.5□□□□□ -0.09
Npc1O35604 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.5□□□□□ -0.09
Npc1O35604 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Npc1O35604 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Npc1O35604 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
Npc1O35604 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npc1O35604 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.49□□□□□ -0.09
Npc1O35604 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Npc1O35604 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Npc1O35604 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.49□□□□□ -0.09
Npc1O35604 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.49□□□□□ -0.09
Npc1O35604 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.49□□□□□ -0.09
Npc1O35604 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.49□□□□□ -0.09
Npc1O35604 Gm10154-201ENSMUST00000084445 354 ntBASIC14.49□□□□□ -0.09
Npc1O35604 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.49□□□□□ -0.09
Npc1O35604 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.49□□□□□ -0.09
Npc1O35604 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Npc1O35604 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Npc1O35604 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Npc1O35604 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Npc1O35604 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Npc1O35604 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.49□□□□□ -0.09
Npc1O35604 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.48□□□□□ -0.09
Npc1O35604 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Npc1O35604 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.48□□□□□ -0.09
Npc1O35604 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.48□□□□□ -0.09
Npc1O35604 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.48□□□□□ -0.09
Npc1O35604 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Npc1O35604 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.48□□□□□ -0.09
Npc1O35604 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Npc1O35604 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Npc1O35604 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.48□□□□□ -0.09
Npc1O35604 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms