Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.58□□□□□ -0.4
Prrt1O35449 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Prrt1O35449 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Prrt1O35449 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Prrt1O35449 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.58□□□□□ -0.4
Prrt1O35449 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Prrt1O35449 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Prrt1O35449 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Prrt1O35449 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.57□□□□□ -0.4
Prrt1O35449 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.57□□□□□ -0.4
Prrt1O35449 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Prrt1O35449 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.57□□□□□ -0.4
Prrt1O35449 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.57□□□□□ -0.4
Prrt1O35449 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.57□□□□□ -0.4
Prrt1O35449 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.57□□□□□ -0.4
Prrt1O35449 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Gm18101-201ENSMUST00000215769 548 ntBASIC12.57□□□□□ -0.4
Prrt1O35449 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.57□□□□□ -0.4
Prrt1O35449 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Prrt1O35449 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Prrt1O35449 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Prrt1O35449 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.56□□□□□ -0.4
Prrt1O35449 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.56□□□□□ -0.4
Prrt1O35449 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.56□□□□□ -0.4
Prrt1O35449 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.56□□□□□ -0.4
Prrt1O35449 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.56□□□□□ -0.4
Prrt1O35449 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.56□□□□□ -0.4
Prrt1O35449 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Prrt1O35449 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Prrt1O35449 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Prrt1O35449 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.56□□□□□ -0.4
Prrt1O35449 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Prrt1O35449 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.56□□□□□ -0.4
Prrt1O35449 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Prrt1O35449 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Prrt1O35449 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.55□□□□□ -0.4
Prrt1O35449 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.55□□□□□ -0.4
Prrt1O35449 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Prrt1O35449 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prrt1O35449 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms