Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ebf3O08791 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.45■□□□□ 0.06
Ebf3O08791 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.45■□□□□ 0.06
Ebf3O08791 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.45■□□□□ 0.06
Ebf3O08791 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ebf3O08791 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
Ebf3O08791 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Ebf3O08791 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 Sybu-209ENSMUST00000228639 4113 ntBASIC15.45■□□□□ 0.06
Ebf3O08791 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ebf3O08791 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ebf3O08791 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ebf3O08791 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ebf3O08791 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Ebf3O08791 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.44■□□□□ 0.06
Ebf3O08791 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.44■□□□□ 0.06
Ebf3O08791 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.44■□□□□ 0.06
Ebf3O08791 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ebf3O08791 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ebf3O08791 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ebf3O08791 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.43■□□□□ 0.06
Ebf3O08791 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.43■□□□□ 0.06
Ebf3O08791 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.43■□□□□ 0.06
Ebf3O08791 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.43■□□□□ 0.06
Ebf3O08791 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.43■□□□□ 0.06
Ebf3O08791 Gm5779-201ENSMUST00000218467 910 ntBASIC15.43■□□□□ 0.06
Ebf3O08791 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.43■□□□□ 0.06
Ebf3O08791 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.43■□□□□ 0.06
Ebf3O08791 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.43■□□□□ 0.06
Ebf3O08791 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ebf3O08791 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ebf3O08791 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Ebf3O08791 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.42■□□□□ 0.06
Ebf3O08791 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ebf3O08791 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ebf3O08791 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.42■□□□□ 0.06
Ebf3O08791 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ebf3O08791 Gm27622-201ENSMUST00000183779 60 ntBASIC15.42■□□□□ 0.06
Ebf3O08791 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ebf3O08791 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ebf3O08791 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ebf3O08791 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms