Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Gm7153-201ENSMUST00000117092 455 ntBASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf11bO08712 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 AV026068-213ENSMUST00000223675 1171 ntBASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf11bO08712 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Tnfrsf11bO08712 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.08■□□□□ 0
Tnfrsf11bO08712 Gm10060-201ENSMUST00000212002 111 ntBASIC15.08■□□□□ 0
Tnfrsf11bO08712 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Gm10819-201ENSMUST00000099988 561 ntBASIC15.08■□□□□ 0
Tnfrsf11bO08712 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.08■□□□□ 0
Tnfrsf11bO08712 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf11bO08712 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.07■□□□□ 0
Tnfrsf11bO08712 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.07■□□□□ 0
Tnfrsf11bO08712 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.07■□□□□ 0
Tnfrsf11bO08712 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf11bO08712 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms