Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Celf4-206ENSMUST00000224553 1729 ntBASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scaf11E9PZM7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Gm15460-201ENSMUST00000118147 391 ntBASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Gm7561-201ENSMUST00000211203 886 ntBASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 AC122459.1-201ENSMUST00000228373 885 ntBASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scaf11E9PZM7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Gm27572-201ENSMUST00000183702 255 ntBASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Gm27486-201ENSMUST00000184923 80 ntBASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Gm37230-201ENSMUST00000194491 818 ntBASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 AC156560.2-201ENSMUST00000221232 264 ntBASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scaf11E9PZM7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scaf11E9PZM7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Scaf11E9PZM7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
Scaf11E9PZM7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Scaf11E9PZM7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.86
Scaf11E9PZM7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Scaf11E9PZM7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Scaf11E9PZM7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.39■□□□□ 0.86
Scaf11E9PZM7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scaf11E9PZM7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scaf11E9PZM7 Gm29127-201ENSMUST00000188304 517 ntBASIC20.39■□□□□ 0.85
Scaf11E9PZM7 Gm38241-201ENSMUST00000192641 898 ntBASIC20.39■□□□□ 0.85
Scaf11E9PZM7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC20.39■□□□□ 0.85
Scaf11E9PZM7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.39■□□□□ 0.85
Scaf11E9PZM7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.39■□□□□ 0.85
Scaf11E9PZM7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Scaf11E9PZM7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scaf11E9PZM7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms