Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh17E9PXF0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh17E9PXF0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Pcdh17E9PXF0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm22065-201ENSMUST00000103753 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm22066-201ENSMUST00000103761 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm24932-201ENSMUST00000103763 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm24115-201ENSMUST00000103799 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm22190-201ENSMUST00000103827 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm22191-201ENSMUST00000103831 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm24721-201ENSMUST00000103849 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm28018-201ENSMUST00000103869 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm26399-201ENSMUST00000103937 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Mir449b-201ENSMUST00000104833 80 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm25349-201ENSMUST00000177728 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm23616-201ENSMUST00000177797 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm25871-201ENSMUST00000177816 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm24752-201ENSMUST00000178240 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm24496-201ENSMUST00000178287 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm25649-201ENSMUST00000178476 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm25548-201ENSMUST00000178681 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm23147-201ENSMUST00000178841 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm26095-201ENSMUST00000179270 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm22171-201ENSMUST00000179283 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm23936-201ENSMUST00000179354 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm22619-201ENSMUST00000179516 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm25255-201ENSMUST00000179579 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm24755-201ENSMUST00000179691 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm26506-201ENSMUST00000179692 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm25086-201ENSMUST00000179931 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm23243-201ENSMUST00000180047 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm24659-201ENSMUST00000180212 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm24169-201ENSMUST00000180244 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm23689-201ENSMUST00000180354 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm27359-201ENSMUST00000184153 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm27785-201ENSMUST00000184268 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm27466-201ENSMUST00000184396 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm27703-201ENSMUST00000184836 110 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdh17E9PXF0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh17E9PXF0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh17E9PXF0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh17E9PXF0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh17E9PXF0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh17E9PXF0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh17E9PXF0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdh17E9PXF0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdh17E9PXF0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms