Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm13216-201ENSMUST00000117145 591 ntBASIC13.3□□□□□ -0.28
Shank1D3YZU1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Gm43630-201ENSMUST00000201550 776 ntBASIC13.3□□□□□ -0.28
Shank1D3YZU1 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.3□□□□□ -0.28
Shank1D3YZU1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shank1D3YZU1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.29□□□□□ -0.28
Shank1D3YZU1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.29□□□□□ -0.28
Shank1D3YZU1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shank1D3YZU1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Gm5566-201ENSMUST00000116118 459 ntBASIC13.28□□□□□ -0.28
Shank1D3YZU1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Gm8515-201ENSMUST00000194852 576 ntBASIC13.28□□□□□ -0.28
Shank1D3YZU1 Gm9908-201ENSMUST00000211534 448 ntBASIC13.28□□□□□ -0.28
Shank1D3YZU1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.28□□□□□ -0.28
Shank1D3YZU1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Gm6745-201ENSMUST00000199216 526 ntBASIC13.28□□□□□ -0.28
Shank1D3YZU1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shank1D3YZU1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Gm11478-201ENSMUST00000117851 599 ntBASIC13.27□□□□□ -0.28
Shank1D3YZU1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Shank1D3YZU1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Shank1D3YZU1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Shank1D3YZU1 AY702102-202ENSMUST00000194651 1173 ntBASIC13.27□□□□□ -0.28
Shank1D3YZU1 Gm18018-201ENSMUST00000198273 408 ntBASIC13.27□□□□□ -0.28
Shank1D3YZU1 Dupd1-202ENSMUST00000224735 548 ntBASIC13.27□□□□□ -0.28
Shank1D3YZU1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms