Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav12d-1A0N8R0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-1A0N8R0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Gm6296-201ENSMUST00000222599 943 ntBASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Trav12d-1A0N8R0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Gm18489-201ENSMUST00000172565 551 ntBASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Gm27704-201ENSMUST00000185094 107 ntBASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-1A0N8R0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms