Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lnp1A0A1B0GSK3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lnp1A0A1B0GSK3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.35□□□□□ -0.43
Lnp1A0A1B0GSK3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.34□□□□□ -0.43
Lnp1A0A1B0GSK3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lnp1A0A1B0GSK3 Carlr-201ENSMUST00000181515 2574 ntBASIC12.34□□□□□ -0.43
Lnp1A0A1B0GSK3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lnp1A0A1B0GSK3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lnp1A0A1B0GSK3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.34□□□□□ -0.43
Lnp1A0A1B0GSK3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lnp1A0A1B0GSK3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lnp1A0A1B0GSK3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms