Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6-5A0A075B6B5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Gm8318-201ENSMUST00000182954 872 ntBASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Gm43767-201ENSMUST00000198933 381 ntBASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6-5A0A075B6B5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Gm21559-201ENSMUST00000220638 855 ntBASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Gm8587-201ENSMUST00000076538 843 ntBASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6-5A0A075B6B5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms