Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.92■□□□□ 0.94
Chaf1bQ9D0N7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1bQ9D0N7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1bQ9D0N7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1bQ9D0N7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.91■□□□□ 0.94
Chaf1bQ9D0N7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1bQ9D0N7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Chaf1bQ9D0N7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1bQ9D0N7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1bQ9D0N7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1bQ9D0N7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1bQ9D0N7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1bQ9D0N7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1bQ9D0N7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chaf1bQ9D0N7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Chaf1bQ9D0N7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chaf1bQ9D0N7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1bQ9D0N7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.87■□□□□ 0.93
Chaf1bQ9D0N7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1bQ9D0N7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.87■□□□□ 0.93
Chaf1bQ9D0N7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1bQ9D0N7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1bQ9D0N7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1bQ9D0N7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chaf1bQ9D0N7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.86■□□□□ 0.93
Chaf1bQ9D0N7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1bQ9D0N7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Chaf1bQ9D0N7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1bQ9D0N7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Chaf1bQ9D0N7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Chaf1bQ9D0N7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1bQ9D0N7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1bQ9D0N7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1bQ9D0N7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Chaf1bQ9D0N7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Chaf1bQ9D0N7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1bQ9D0N7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chaf1bQ9D0N7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chaf1bQ9D0N7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chaf1bQ9D0N7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1bQ9D0N7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.81■□□□□ 0.92
Chaf1bQ9D0N7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chaf1bQ9D0N7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.81■□□□□ 0.92
Chaf1bQ9D0N7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.8■□□□□ 0.92
Chaf1bQ9D0N7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.8■□□□□ 0.92
Chaf1bQ9D0N7 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.8■□□□□ 0.92
Chaf1bQ9D0N7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1bQ9D0N7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Chaf1bQ9D0N7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Chaf1bQ9D0N7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chaf1bQ9D0N7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1bQ9D0N7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1bQ9D0N7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1bQ9D0N7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1bQ9D0N7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1bQ9D0N7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chaf1bQ9D0N7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chaf1bQ9D0N7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chaf1bQ9D0N7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chaf1bQ9D0N7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chaf1bQ9D0N7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chaf1bQ9D0N7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chaf1bQ9D0N7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chaf1bQ9D0N7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chaf1bQ9D0N7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chaf1bQ9D0N7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Chaf1bQ9D0N7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chaf1bQ9D0N7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chaf1bQ9D0N7 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.74■□□□□ 0.91
Chaf1bQ9D0N7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chaf1bQ9D0N7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chaf1bQ9D0N7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chaf1bQ9D0N7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chaf1bQ9D0N7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chaf1bQ9D0N7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chaf1bQ9D0N7 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.73■□□□□ 0.91
Chaf1bQ9D0N7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chaf1bQ9D0N7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chaf1bQ9D0N7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Chaf1bQ9D0N7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chaf1bQ9D0N7 Nkain2-201ENSMUST00000092602 558 ntBASIC20.72■□□□□ 0.91
Chaf1bQ9D0N7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chaf1bQ9D0N7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chaf1bQ9D0N7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chaf1bQ9D0N7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.71■□□□□ 0.91
Chaf1bQ9D0N7 Gm37136-201ENSMUST00000194368 194 ntBASIC20.71■□□□□ 0.91
Chaf1bQ9D0N7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Chaf1bQ9D0N7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chaf1bQ9D0N7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chaf1bQ9D0N7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms