Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Vopp1Q8R1C3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vopp1Q8R1C3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Vopp1Q8R1C3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Vopp1Q8R1C3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Vopp1Q8R1C3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Vopp1Q8R1C3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Vopp1Q8R1C3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vopp1Q8R1C3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Vopp1Q8R1C3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.31■■□□□ 1.48
Vopp1Q8R1C3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Vopp1Q8R1C3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vopp1Q8R1C3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Vopp1Q8R1C3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Vopp1Q8R1C3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Vopp1Q8R1C3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vopp1Q8R1C3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vopp1Q8R1C3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vopp1Q8R1C3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.3■■□□□ 1.48
Vopp1Q8R1C3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vopp1Q8R1C3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vopp1Q8R1C3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vopp1Q8R1C3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Vopp1Q8R1C3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Vopp1Q8R1C3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Vopp1Q8R1C3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vopp1Q8R1C3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vopp1Q8R1C3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vopp1Q8R1C3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Vopp1Q8R1C3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vopp1Q8R1C3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.28■■□□□ 1.48
Vopp1Q8R1C3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Vopp1Q8R1C3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vopp1Q8R1C3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vopp1Q8R1C3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Vopp1Q8R1C3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Vopp1Q8R1C3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vopp1Q8R1C3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.27■■□□□ 1.48
Vopp1Q8R1C3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Vopp1Q8R1C3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Vopp1Q8R1C3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.25■■□□□ 1.47
Vopp1Q8R1C3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vopp1Q8R1C3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vopp1Q8R1C3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vopp1Q8R1C3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Vopp1Q8R1C3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.24■■□□□ 1.47
Vopp1Q8R1C3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Vopp1Q8R1C3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Vopp1Q8R1C3 Gm43566-201ENSMUST00000196851 808 ntBASIC24.22■■□□□ 1.47
Vopp1Q8R1C3 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.22■■□□□ 1.47
Vopp1Q8R1C3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.21■■□□□ 1.47
Vopp1Q8R1C3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Vopp1Q8R1C3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vopp1Q8R1C3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vopp1Q8R1C3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vopp1Q8R1C3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Vopp1Q8R1C3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vopp1Q8R1C3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vopp1Q8R1C3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vopp1Q8R1C3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Vopp1Q8R1C3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Vopp1Q8R1C3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vopp1Q8R1C3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Vopp1Q8R1C3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vopp1Q8R1C3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.18■■□□□ 1.46
Vopp1Q8R1C3 Gm45444-201ENSMUST00000211394 898 ntBASIC24.18■■□□□ 1.46
Vopp1Q8R1C3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vopp1Q8R1C3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vopp1Q8R1C3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Vopp1Q8R1C3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Vopp1Q8R1C3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.17■■□□□ 1.46
Vopp1Q8R1C3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
Vopp1Q8R1C3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Vopp1Q8R1C3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Vopp1Q8R1C3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Vopp1Q8R1C3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Vopp1Q8R1C3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.16■■□□□ 1.46
Vopp1Q8R1C3 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.15■■□□□ 1.46
Vopp1Q8R1C3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vopp1Q8R1C3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Vopp1Q8R1C3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Vopp1Q8R1C3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Vopp1Q8R1C3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Vopp1Q8R1C3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vopp1Q8R1C3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vopp1Q8R1C3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Vopp1Q8R1C3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vopp1Q8R1C3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vopp1Q8R1C3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Vopp1Q8R1C3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vopp1Q8R1C3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms