Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Smc4Q8CG47 Gm7199-201ENSMUST00000118327 1485 ntBASIC27.64■■■□□ 2.02
Smc4Q8CG47 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Smc4Q8CG47 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Smc4Q8CG47 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Smc4Q8CG47 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Smc4Q8CG47 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
Smc4Q8CG47 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Smc4Q8CG47 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Smc4Q8CG47 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.62■■■□□ 2.01
Smc4Q8CG47 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC27.62■■■□□ 2.01
Smc4Q8CG47 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Smc4Q8CG47 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Smc4Q8CG47 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.62■■■□□ 2.01
Smc4Q8CG47 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Smc4Q8CG47 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Smc4Q8CG47 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
Smc4Q8CG47 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Smc4Q8CG47 Gm5921-201ENSMUST00000075898 882 ntBASIC27.61■■■□□ 2.01
Smc4Q8CG47 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Smc4Q8CG47 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Smc4Q8CG47 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Smc4Q8CG47 Gm43592-201ENSMUST00000196922 1165 ntBASIC27.6■■■□□ 2.01
Smc4Q8CG47 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smc4Q8CG47 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Smc4Q8CG47 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smc4Q8CG47 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smc4Q8CG47 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Smc4Q8CG47 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Smc4Q8CG47 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Smc4Q8CG47 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Smc4Q8CG47 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC27.57■■■□□ 2
Smc4Q8CG47 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC27.57■■■□□ 2
Smc4Q8CG47 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.57■■■□□ 2
Smc4Q8CG47 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Smc4Q8CG47 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Smc4Q8CG47 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC27.57■■■□□ 2
Smc4Q8CG47 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Smc4Q8CG47 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Smc4Q8CG47 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC27.57■■■□□ 2
Smc4Q8CG47 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC27.56■■■□□ 2
Smc4Q8CG47 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Smc4Q8CG47 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Smc4Q8CG47 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Smc4Q8CG47 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.55■■■□□ 2
Smc4Q8CG47 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.55■■■□□ 2
Smc4Q8CG47 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC27.55■■■□□ 2
Smc4Q8CG47 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Smc4Q8CG47 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC27.54■■■□□ 2
Smc4Q8CG47 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC27.54■■■□□ 2
Smc4Q8CG47 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Smc4Q8CG47 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.53■■■□□ 2
Smc4Q8CG47 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC27.52■■■□□ 2
Smc4Q8CG47 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Smc4Q8CG47 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Smc4Q8CG47 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
Smc4Q8CG47 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Smc4Q8CG47 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Smc4Q8CG47 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Smc4Q8CG47 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
Smc4Q8CG47 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Smc4Q8CG47 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Smc4Q8CG47 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Smc4Q8CG47 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Smc4Q8CG47 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC27.49■■□□□ 1.99
Smc4Q8CG47 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Smc4Q8CG47 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Smc4Q8CG47 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Smc4Q8CG47 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Smc4Q8CG47 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Smc4Q8CG47 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
Smc4Q8CG47 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Smc4Q8CG47 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Smc4Q8CG47 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC27.47■■□□□ 1.99
Smc4Q8CG47 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC27.46■■□□□ 1.99
Smc4Q8CG47 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC27.46■■□□□ 1.99
Smc4Q8CG47 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Smc4Q8CG47 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Smc4Q8CG47 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Smc4Q8CG47 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Smc4Q8CG47 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Smc4Q8CG47 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Smc4Q8CG47 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Smc4Q8CG47 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Smc4Q8CG47 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Smc4Q8CG47 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Smc4Q8CG47 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.43■■□□□ 1.98
Smc4Q8CG47 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Smc4Q8CG47 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Smc4Q8CG47 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Smc4Q8CG47 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Smc4Q8CG47 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC27.43■■□□□ 1.98
Smc4Q8CG47 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Smc4Q8CG47 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Smc4Q8CG47 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Smc4Q8CG47 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Smc4Q8CG47 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Smc4Q8CG47 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.41■■□□□ 1.98
Smc4Q8CG47 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC27.41■■□□□ 1.98
Smc4Q8CG47 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms