Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cdk5rap1Q8BTW8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdk5rap1Q8BTW8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.22■□□□□ 0.99
Cdk5rap1Q8BTW8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdk5rap1Q8BTW8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cdk5rap1Q8BTW8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdk5rap1Q8BTW8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdk5rap1Q8BTW8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdk5rap1Q8BTW8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap1Q8BTW8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap1Q8BTW8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Gm5921-201ENSMUST00000075898 882 ntBASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk5rap1Q8BTW8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk5rap1Q8BTW8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Cdk5rap1Q8BTW8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Cdk5rap1Q8BTW8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.14■□□□□ 0.98
Cdk5rap1Q8BTW8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdk5rap1Q8BTW8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdk5rap1Q8BTW8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdk5rap1Q8BTW8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk5rap1Q8BTW8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk5rap1Q8BTW8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk5rap1Q8BTW8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk5rap1Q8BTW8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk5rap1Q8BTW8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk5rap1Q8BTW8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk5rap1Q8BTW8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cdk5rap1Q8BTW8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdk5rap1Q8BTW8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cdk5rap1Q8BTW8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdk5rap1Q8BTW8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdk5rap1Q8BTW8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdk5rap1Q8BTW8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms