Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx58Q6Q899 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx58Q6Q899 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx58Q6Q899 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx58Q6Q899 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx58Q6Q899 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.91■■■□□ 2.06
Ddx58Q6Q899 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx58Q6Q899 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC27.91■■■□□ 2.06
Ddx58Q6Q899 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
Ddx58Q6Q899 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Ddx58Q6Q899 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.89■■■□□ 2.06
Ddx58Q6Q899 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ddx58Q6Q899 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ddx58Q6Q899 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ddx58Q6Q899 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Ddx58Q6Q899 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Ddx58Q6Q899 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
Ddx58Q6Q899 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx58Q6Q899 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Ddx58Q6Q899 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx58Q6Q899 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx58Q6Q899 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ddx58Q6Q899 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Ddx58Q6Q899 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ddx58Q6Q899 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ddx58Q6Q899 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Ddx58Q6Q899 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx58Q6Q899 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx58Q6Q899 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC27.84■■■□□ 2.05
Ddx58Q6Q899 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ddx58Q6Q899 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Ddx58Q6Q899 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ddx58Q6Q899 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
Ddx58Q6Q899 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC27.83■■■□□ 2.05
Ddx58Q6Q899 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ddx58Q6Q899 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ddx58Q6Q899 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ddx58Q6Q899 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ddx58Q6Q899 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ddx58Q6Q899 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ddx58Q6Q899 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ddx58Q6Q899 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ddx58Q6Q899 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ddx58Q6Q899 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC27.8■■■□□ 2.04
Ddx58Q6Q899 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
Ddx58Q6Q899 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
Ddx58Q6Q899 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ddx58Q6Q899 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Ddx58Q6Q899 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ddx58Q6Q899 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC27.78■■■□□ 2.04
Ddx58Q6Q899 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Ddx58Q6Q899 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ddx58Q6Q899 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Ddx58Q6Q899 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx58Q6Q899 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx58Q6Q899 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx58Q6Q899 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC27.77■■■□□ 2.04
Ddx58Q6Q899 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC27.77■■■□□ 2.04
Ddx58Q6Q899 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx58Q6Q899 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ddx58Q6Q899 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
Ddx58Q6Q899 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Ddx58Q6Q899 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ddx58Q6Q899 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.76■■■□□ 2.03
Ddx58Q6Q899 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Ddx58Q6Q899 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Ddx58Q6Q899 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ddx58Q6Q899 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Ddx58Q6Q899 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Ddx58Q6Q899 Gm5812-201ENSMUST00000061073 957 ntBASIC27.74■■■□□ 2.03
Ddx58Q6Q899 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Ddx58Q6Q899 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ddx58Q6Q899 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Ddx58Q6Q899 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ddx58Q6Q899 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
Ddx58Q6Q899 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ddx58Q6Q899 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ddx58Q6Q899 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC27.72■■■□□ 2.03
Ddx58Q6Q899 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Ddx58Q6Q899 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Ddx58Q6Q899 Nsd1-203ENSMUST00000224156 1149 ntBASIC27.71■■■□□ 2.03
Ddx58Q6Q899 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx58Q6Q899 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx58Q6Q899 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC27.7■■■□□ 2.03
Ddx58Q6Q899 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Ddx58Q6Q899 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.7■■■□□ 2.02
Ddx58Q6Q899 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC27.69■■■□□ 2.02
Ddx58Q6Q899 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC27.69■■■□□ 2.02
Ddx58Q6Q899 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Ddx58Q6Q899 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Ddx58Q6Q899 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Ddx58Q6Q899 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.68■■■□□ 2.02
Ddx58Q6Q899 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC27.68■■■□□ 2.02
Ddx58Q6Q899 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx58Q6Q899 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC27.68■■■□□ 2.02
Ddx58Q6Q899 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Ddx58Q6Q899 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx58Q6Q899 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
Ddx58Q6Q899 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Ddx58Q6Q899 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms