Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcb1Q9Z0H3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Gm29541-201ENSMUST00000191351 678 ntBASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcb1Q9Z0H3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Gm8410-201ENSMUST00000117225 605 ntBASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcb1Q9Z0H3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Gm18766-201ENSMUST00000189811 808 ntBASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Gm2451-201ENSMUST00000199447 999 ntBASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Gm10290-201ENSMUST00000200451 999 ntBASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Gm20949-201ENSMUST00000206478 952 ntBASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Smarcb1Q9Z0H3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms