Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Gm18489-201ENSMUST00000172565 551 ntBASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim3Q9R1R2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.01□□□□□ -0.17
Trim3Q9R1R2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim3Q9R1R2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim3Q9R1R2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14□□□□□ -0.17
Trim3Q9R1R2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14□□□□□ -0.17
Trim3Q9R1R2 Gm5253-201ENSMUST00000187104 1025 ntBASIC14□□□□□ -0.17
Trim3Q9R1R2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14□□□□□ -0.17
Trim3Q9R1R2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14□□□□□ -0.17
Trim3Q9R1R2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14□□□□□ -0.17
Trim3Q9R1R2 Gm45167-201ENSMUST00000208007 322 ntBASIC14□□□□□ -0.17
Trim3Q9R1R2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Trim3Q9R1R2 AC147366.1-201ENSMUST00000227671 852 ntBASIC14□□□□□ -0.17
Trim3Q9R1R2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14□□□□□ -0.17
Trim3Q9R1R2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
Trim3Q9R1R2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14□□□□□ -0.17
Trim3Q9R1R2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim3Q9R1R2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Gm9682-201ENSMUST00000197505 556 ntBASIC13.99□□□□□ -0.17
Trim3Q9R1R2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms