Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
Msh5Q9QUM7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Gm14126-201ENSMUST00000122345 395 ntBASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Gm11452-201ENSMUST00000122376 690 ntBASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Gm5656-201ENSMUST00000171020 1096 ntBASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Gm37809-201ENSMUST00000195050 931 ntBASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Gm6296-201ENSMUST00000222599 943 ntBASIC15.35■□□□□ 0.05
Msh5Q9QUM7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.35■□□□□ 0.05
Msh5Q9QUM7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Msh5Q9QUM7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Mir669o-201ENSMUST00000103898 96 ntBASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm5864-201ENSMUST00000202263 970 ntBASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm28359-201ENSMUST00000187470 1322 ntBASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Msh5Q9QUM7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Msh5Q9QUM7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Msh5Q9QUM7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Msh5Q9QUM7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Msh5Q9QUM7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Msh5Q9QUM7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Msh5Q9QUM7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Msh5Q9QUM7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Msh5Q9QUM7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Msh5Q9QUM7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Gm8344-201ENSMUST00000119813 856 ntBASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms