Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.91□□□□□ -0.02
Vps35Q9EQH3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps35Q9EQH3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Efs-202ENSMUST00000227037 2540 ntBASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm12008-201ENSMUST00000117791 755 ntBASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps35Q9EQH3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Gm5264-201ENSMUST00000190584 848 ntBASIC14.89□□□□□ -0.03
Vps35Q9EQH3 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Vps35Q9EQH3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps35Q9EQH3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms