Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf1Q9EPU4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Gm15487-201ENSMUST00000122373 465 ntBASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Gm43703-201ENSMUST00000200523 763 ntBASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf1Q9EPU4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Gm27989-201ENSMUST00000184721 107 ntBASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Gm44344-201ENSMUST00000200287 129 ntBASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Shd-206ENSMUST00000225145 998 ntBASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 AC156016.3-201ENSMUST00000228623 344 ntBASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf1Q9EPU4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf1Q9EPU4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf1Q9EPU4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cpsf1Q9EPU4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf1Q9EPU4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf1Q9EPU4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Cpsf1Q9EPU4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf1Q9EPU4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Gm15653-201ENSMUST00000119247 907 ntBASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Cpsf1Q9EPU4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 AA619741-201ENSMUST00000195095 646 ntBASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf1Q9EPU4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms