Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Cdc40Q9DC48 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdc40Q9DC48 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdc40Q9DC48 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdc40Q9DC48 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Cdc40Q9DC48 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdc40Q9DC48 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Gm44492-201ENSMUST00000197012 141 ntBASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdc40Q9DC48 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdc40Q9DC48 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdc40Q9DC48 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms