Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm6089-201ENSMUST00000197666 938 ntBASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Gm6376-201ENSMUST00000209407 580 ntBASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chmp4cQ9D7F7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Celf4-206ENSMUST00000224553 1729 ntBASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Gm25990-201ENSMUST00000102440 86 ntBASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chmp4cQ9D7F7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.8■□□□□ 0.44
Chmp4cQ9D7F7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp4cQ9D7F7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp4cQ9D7F7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms