Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Gm27989-201ENSMUST00000184721 107 ntBASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Mir6977-201ENSMUST00000184960 64 ntBASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Stag1Q9D3E6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Gm25144-201ENSMUST00000179561 110 ntBASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Gm25352-201ENSMUST00000179815 110 ntBASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Stag1Q9D3E6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Stag1Q9D3E6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Stag1Q9D3E6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms