Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim11Q99PQ2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim11Q99PQ2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.96■□□□□ 0.3
Trim11Q99PQ2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Gm18195-201ENSMUST00000207604 706 ntBASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trim11Q99PQ2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Gm12134-201ENSMUST00000122109 520 ntBASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim11Q99PQ2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim11Q99PQ2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim11Q99PQ2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms