Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.58□□□□□ -0.08
Trim16Q99PP9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim16Q99PP9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim16Q99PP9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Gm12350-201ENSMUST00000121208 462 ntBASIC14.56□□□□□ -0.08
Trim16Q99PP9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Mir5126-201ENSMUST00000175513 77 ntBASIC14.56□□□□□ -0.08
Trim16Q99PP9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim16Q99PP9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.55□□□□□ -0.08
Trim16Q99PP9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Gm18733-201ENSMUST00000173950 856 ntBASIC14.55□□□□□ -0.08
Trim16Q99PP9 Gm37153-201ENSMUST00000193637 231 ntBASIC14.55□□□□□ -0.08
Trim16Q99PP9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.55□□□□□ -0.08
Trim16Q99PP9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim16Q99PP9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms