Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim33Q99PP7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim33Q99PP7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim33Q99PP7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim33Q99PP7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim33Q99PP7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim33Q99PP7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim33Q99PP7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim33Q99PP7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim33Q99PP7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim33Q99PP7 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.77□□□□□ -0.04
Trim33Q99PP7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.77□□□□□ -0.05
Trim33Q99PP7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim33Q99PP7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim33Q99PP7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Trim33Q99PP7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.76□□□□□ -0.05
Trim33Q99PP7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.76□□□□□ -0.05
Trim33Q99PP7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.76□□□□□ -0.05
Trim33Q99PP7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.76□□□□□ -0.05
Trim33Q99PP7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Trim33Q99PP7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Gm6443-201ENSMUST00000203599 874 ntBASIC14.75□□□□□ -0.05
Trim33Q99PP7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim33Q99PP7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms