Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm21470-201ENSMUST00000187680 696 ntBASIC16.55■□□□□ 0.24
Pcdh15Q99PJ1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh15Q99PJ1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh15Q99PJ1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh15Q99PJ1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh15Q99PJ1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh15Q99PJ1 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh15Q99PJ1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Gm12928-201ENSMUST00000117115 573 ntBASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Gm5187-201ENSMUST00000117317 991 ntBASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Gm4804-201ENSMUST00000182234 999 ntBASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Gm43094-201ENSMUST00000196549 921 ntBASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh15Q99PJ1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdh15Q99PJ1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh15Q99PJ1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.51■□□□□ 0.23
Pcdh15Q99PJ1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms