Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac9Q99N13 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac9Q99N13 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac9Q99N13 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac9Q99N13 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac9Q99N13 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac9Q99N13 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac9Q99N13 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.43■□□□□ 0.38
Hdac9Q99N13 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.43■□□□□ 0.38
Hdac9Q99N13 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.43■□□□□ 0.38
Hdac9Q99N13 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac9Q99N13 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm6222-201ENSMUST00000120787 396 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm29310-201ENSMUST00000185468 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21825-201ENSMUST00000185728 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm29109-201ENSMUST00000185895 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21896-201ENSMUST00000186520 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21873-201ENSMUST00000186728 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21794-201ENSMUST00000187056 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21880-201ENSMUST00000187275 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21826-201ENSMUST00000187451 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21198-201ENSMUST00000188393 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21749-201ENSMUST00000189343 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21901-201ENSMUST00000189568 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm29424-201ENSMUST00000189716 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm28599-201ENSMUST00000189838 694 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21867-201ENSMUST00000189917 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm29269-201ENSMUST00000190087 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21722-201ENSMUST00000190153 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm28423-201ENSMUST00000190701 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21899-201ENSMUST00000190745 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21910-201ENSMUST00000191163 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21849-201ENSMUST00000191571 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm28678-201ENSMUST00000191593 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm20910-201ENSMUST00000193268 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm21871-201ENSMUST00000194621 696 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.42■□□□□ 0.38
Hdac9Q99N13 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac9Q99N13 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac9Q99N13 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms