Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Gm7862-201ENSMUST00000121461 292 ntBASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cstf3Q99LI7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cstf3Q99LI7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cstf3Q99LI7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf3Q99LI7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf3Q99LI7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms