Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdha9Q91Y11 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Gm25911-201ENSMUST00000157621 56 ntBASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdha9Q91Y11 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Gm20553-201ENSMUST00000204205 844 ntBASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Gm45612-201ENSMUST00000211320 160 ntBASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdha9Q91Y11 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Gm11025-201ENSMUST00000140773 466 ntBASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdha9Q91Y11 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms