Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Carlr-201ENSMUST00000181515 2574 ntBASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb1Q91Y08 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb1Q91Y08 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb1Q91Y08 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb1Q91Y08 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb1Q91Y08 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb1Q91Y08 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb1Q91Y08 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb1Q91Y08 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb1Q91Y08 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb1Q91Y08 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms