Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Gm12928-201ENSMUST00000117115 573 ntBASIC17.4■□□□□ 0.38
StrcQ8VIM6 Gm13612-201ENSMUST00000119276 390 ntBASIC17.4■□□□□ 0.38
StrcQ8VIM6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.4■□□□□ 0.38
StrcQ8VIM6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
StrcQ8VIM6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.39■□□□□ 0.37
StrcQ8VIM6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.39■□□□□ 0.37
StrcQ8VIM6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Gm4804-201ENSMUST00000182234 999 ntBASIC17.39■□□□□ 0.37
StrcQ8VIM6 Gm38241-201ENSMUST00000192641 898 ntBASIC17.39■□□□□ 0.37
StrcQ8VIM6 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.39■□□□□ 0.37
StrcQ8VIM6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.39■□□□□ 0.37
StrcQ8VIM6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
StrcQ8VIM6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.38■□□□□ 0.37
StrcQ8VIM6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
StrcQ8VIM6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Gm7399-201ENSMUST00000032395 858 ntBASIC17.38■□□□□ 0.37
StrcQ8VIM6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
StrcQ8VIM6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Gm43094-201ENSMUST00000196549 921 ntBASIC17.37■□□□□ 0.37
StrcQ8VIM6 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.37■□□□□ 0.37
StrcQ8VIM6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.37■□□□□ 0.37
StrcQ8VIM6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.37■□□□□ 0.37
StrcQ8VIM6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
StrcQ8VIM6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
StrcQ8VIM6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
StrcQ8VIM6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.36■□□□□ 0.37
StrcQ8VIM6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
StrcQ8VIM6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms