Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Gm45747-201ENSMUST00000212203 999 ntBASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg1dQ8VE91 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg1dQ8VE91 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Retreg1dQ8VE91 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retreg1dQ8VE91 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Retreg1dQ8VE91 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms