Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.11■□□□□ 0.33
Usp33Q8R5K2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Gm27838-201ENSMUST00000184829 128 ntBASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Gm9794-201ENSMUST00000202370 423 ntBASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.1■□□□□ 0.33
Usp33Q8R5K2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp33Q8R5K2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp33Q8R5K2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp33Q8R5K2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp33Q8R5K2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Usp33Q8R5K2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp33Q8R5K2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp33Q8R5K2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp33Q8R5K2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp33Q8R5K2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp33Q8R5K2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp33Q8R5K2 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Gm27680-201ENSMUST00000184192 160 ntBASIC17.08■□□□□ 0.32
Usp33Q8R5K2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp33Q8R5K2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms