Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Gm14722-201ENSMUST00000118943 689 ntBASIC15.33■□□□□ 0.04
Suds3Q8BR65 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.33■□□□□ 0.04
Suds3Q8BR65 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Suds3Q8BR65 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.33■□□□□ 0.04
Suds3Q8BR65 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Gm12260-201ENSMUST00000122447 411 ntBASIC15.32■□□□□ 0.04
Suds3Q8BR65 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Suds3Q8BR65 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.32■□□□□ 0.04
Suds3Q8BR65 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Suds3Q8BR65 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.31■□□□□ 0.04
Suds3Q8BR65 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gm13036-201ENSMUST00000117799 748 ntBASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gm11594-201ENSMUST00000122313 162 ntBASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gm27628-201ENSMUST00000184911 107 ntBASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.31■□□□□ 0.04
Suds3Q8BR65 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.3■□□□□ 0.04
Suds3Q8BR65 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.3■□□□□ 0.04
Suds3Q8BR65 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.3■□□□□ 0.04
Suds3Q8BR65 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms