Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp54Q8BL06 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Gm28911-201ENSMUST00000188837 117 ntBASIC20.85■□□□□ 0.93
Usp54Q8BL06 Gm6007-201ENSMUST00000208170 823 ntBASIC20.85■□□□□ 0.93
Usp54Q8BL06 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC20.85■□□□□ 0.93
Usp54Q8BL06 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Gm42690-201ENSMUST00000197921 1836 ntBASIC20.85■□□□□ 0.93
Usp54Q8BL06 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Gm2495-201ENSMUST00000191160 466 ntBASIC20.85■□□□□ 0.93
Usp54Q8BL06 Gm7067-201ENSMUST00000207698 1249 ntBASIC20.85■□□□□ 0.93
Usp54Q8BL06 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp54Q8BL06 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp54Q8BL06 AC166574.6-201ENSMUST00000227889 1806 ntBASIC20.84■□□□□ 0.93
Usp54Q8BL06 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC20.84■□□□□ 0.93
Usp54Q8BL06 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Gm5356-201ENSMUST00000093326 615 ntBASIC20.84■□□□□ 0.93
Usp54Q8BL06 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.84■□□□□ 0.93
Usp54Q8BL06 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp54Q8BL06 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp54Q8BL06 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Usp54Q8BL06 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp54Q8BL06 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Usp54Q8BL06 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Usp54Q8BL06 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC20.83■□□□□ 0.92
Usp54Q8BL06 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Usp54Q8BL06 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp54Q8BL06 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Usp54Q8BL06 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp54Q8BL06 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp54Q8BL06 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Usp54Q8BL06 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp54Q8BL06 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC20.82■□□□□ 0.92
Usp54Q8BL06 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Gm43630-201ENSMUST00000201550 776 ntBASIC20.82■□□□□ 0.92
Usp54Q8BL06 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Usp54Q8BL06 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp54Q8BL06 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Gm8463-201ENSMUST00000208573 613 ntBASIC20.81■□□□□ 0.92
Usp54Q8BL06 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp54Q8BL06 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Gm11425-201ENSMUST00000119608 498 ntBASIC20.8■□□□□ 0.92
Usp54Q8BL06 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp54Q8BL06 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp54Q8BL06 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms