Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Gm15039-201ENSMUST00000118914 875 ntBASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Slc5a7Q8BGY9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Gm18959-201ENSMUST00000208954 655 ntBASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc5a7Q8BGY9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Gm10812-201ENSMUST00000099864 546 ntBASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.03□□□□□ -0.32
Slc5a7Q8BGY9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms