Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trnp1Q80ZI1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 BC001981-202ENSMUST00000191393 1545 ntBASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Gm12341-201ENSMUST00000119724 503 ntBASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Gm15393-201ENSMUST00000120499 219 ntBASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Mir1982-201ENSMUST00000157368 74 ntBASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Gm33320-201ENSMUST00000192232 530 ntBASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trnp1Q80ZI1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trnp1Q80ZI1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trnp1Q80ZI1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Gm27892-201ENSMUST00000185017 106 ntBASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.64■□□□□ 0.25
Trnp1Q80ZI1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trnp1Q80ZI1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trnp1Q80ZI1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trnp1Q80ZI1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trnp1Q80ZI1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trnp1Q80ZI1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms